Demos
Below, we showcase demos of AI agents created by Paper2Agent, illustrating how each agent applies the tools from its source paper to tackle scientific tasks.
🧬 AlphaGenome Agent for Genomic Data Interpretation
Example query:
Analyze heart gene expression data with AlphaGenome MCP to identify the causal genefor the variant chr11:116837649:T>G, associated with Hypoalphalipoproteinemia.
🤖 How to Create AlphaGenome and other Paper Agents?
To streamline usage, we recommend creating Paper Agents by connecting Paper MCP servers to an AI coding agent, such as Claude Code or the Google Gemini CLI (it's free with a Google account!).
We are also actively developing our own Chatbot-based agent, which will be released soon.
⚙️ Using Claude Code
First, install and set up Claude Code:
npm install -g @anthropic-ai/claude-code
claude
After setup, link Claude Code with the Paper MCP server of interest. For example, to create an AlphaGenome Agent, run:
claude mcp add --transport http alphagenome https://Paper2Agent-alphagenome-mcp.hf.space/mcp
claude
✅ You will now have an AlphaGenome Agent ready for genomics data interpretation.